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RPS2P4 ribosomal protein S2 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 92427, updated on 10-Oct-2023

Summary

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Official Symbol
RPS2P4provided by HGNC
Official Full Name
ribosomal protein S2 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:19814
See related
Ensembl:ENSG00000196183 AllianceGenome:HGNC:19814
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS2_20_1415
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Genomic context

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See RPS2P4 in Genome Data Viewer
Location:
14q32.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (104835957..104836907, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (99081871..99082826, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (105302294..105303244, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:105288569-105289200 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6204 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:105293203-105293988 Neighboring gene VEGFC mRNA stability associated lncRNA Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:105293989-105294774 Neighboring gene ribosomal protein S26 pseudogene 49 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:105301829-105302097 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:105310441-105311052 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:105311053-105311664 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:105322233-105322734 Neighboring gene uncharacterized LOC124903397 Neighboring gene microRNA 12121 Neighboring gene centrosomal protein 170B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002522.4 

    Range
    101..1051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    104835957..104836907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    99081871..99082826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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