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OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA [ Homo sapiens (human) ]

Gene ID: 90271, updated on 10-Oct-2023

Summary

Official Symbol
OLMALINCprovided by HGNC
Official Full Name
oligodendrocyte maturation-associated long intergenic non-coding RNAprovided by HGNC
Primary source
HGNC:HGNC:28060
See related
Ensembl:ENSG00000235823 MIM:616240; AllianceGenome:HGNC:28060
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C10orf75; HI-LNC80; LINC00263; NCRNA00263; OLMALINCAS
Expression
Ubiquitous expression in brain (RPKM 10.8), ovary (RPKM 8.8) and 24 other tissues See more
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Genomic context

Location:
10q24.31
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (100373576..100388354)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (101257807..101272632)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (102133333..102148111)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene polycystin 2 like 1, transient receptor potential cation channel Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3887 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3888 Neighboring gene Sharpr-MPRA regulatory region 15237 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:102106425-102107016 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102114334-102114834 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102132955-102133524 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102133525-102134092 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102134093-102134662 Neighboring gene stearoyl-CoA desaturase Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:102214151-102214652 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:102242041-102242696 Neighboring gene VISTA enhancer hs1006 Neighboring gene Wnt family member 8B Neighboring gene SEC31 homolog B, COPII coat complex component Neighboring gene MPRA-validated peak1070 silencer

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • Human Islet Long Non Coding RNA 80
  • long intergenic non-protein coding RNA 263
  • oligodendrocyte maturation-associated long intervening non-coding RNA

Clone Names

  • FLJ12974

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026762.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC045787, BC062533, CB159470
    Related
    ENST00000659159.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    100373576..100388354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    101257807..101272632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)