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CCND3P1 cyclin D3 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 897, updated on 10-Oct-2023

Summary

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Official Symbol
CCND3P1provided by HGNC
Official Full Name
cyclin D3 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:1586
See related
Ensembl:ENSG00000224473 AllianceGenome:HGNC:1586
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CCND3P
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Genomic context

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See CCND3P1 in Genome Data Viewer
Location:
10p11.23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (30403194..30403821, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (30434197..30434824, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (30692123..30692750, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:30661753-30662712 Neighboring gene GOLGA2 pseudogene 6 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:30662713-30663672 Neighboring gene microRNA 7162 Neighboring gene NIFK pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3209 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3210 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3211 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:30721100-30721981 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3212 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2267 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3213 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3214 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:30724077-30724614 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:30724615-30725150 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3216 Neighboring gene mitogen-activated protein kinase kinase kinase 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3217 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and chromosomal mapping of CCND genes encoding human D-type cyclins. Xiong Y, et al. Genomics, 1992 Jul. PMID 1386336
  2. Genomic organization, chromosomal localization, and independent expression of human cyclin D genes. Inaba T, et al. Genomics, 1992 Jul. PMID 1386335

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001093.3 

    Range
    101..728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    30403194..30403821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    30434197..30434824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases