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KRT87P keratin 87, pseudogene [ Homo sapiens (human) ]

Gene ID: 85349, updated on 10-Oct-2023

Summary

Official Symbol
KRT87Pprovided by HGNC
Official Full Name
keratin 87, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:30198
See related
Ensembl:ENSG00000135477 AllianceGenome:HGNC:30198
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KRT121P; KRTHBP4; psihHbD
Summary
Located in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See KRT87P in Genome Data Viewer
Location:
12q13.13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (52250544..52258508, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (52214188..52222152, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (52644328..52652292, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:52627613-52628588 Neighboring gene thiol methyltransferase 1A pseudogene 1 Neighboring gene keratin 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52636625-52637600 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6397 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6398 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:52643584-52644190 Neighboring gene KRT7 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52645720-52646220 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52646221-52646721 Neighboring gene keratin 88, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:52673861-52675060 Neighboring gene keratin 86 Neighboring gene keratin 81 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:52698416-52698916

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • keratin 121 pseudogene
  • keratin, hair, basic pseudogene 4
  • keratin-81-like protein
  • psihHbD hair keratin pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146088.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC021066, AK300121, BI828482, BI829625
    Related
    ENST00000534226.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    52250544..52258508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    52214188..52222152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_000944.2: Suppressed sequence

    Description
    NG_000944.2: This RefSeq was removed because it is now thought that this locus is transcribed.