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H2AC3P H2A clustered histone 3, pseudogene [ Homo sapiens (human) ]

Gene ID: 85303, updated on 10-Oct-2023

Summary

Official Symbol
H2AC3Pprovided by HGNC
Official Full Name
H2A clustered histone 3, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:18804
See related
AllianceGenome:HGNC:18804
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
H2A/T; H2AFTP; dJ139G21.2; HIST1H2APS2
Summary
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 6. [provided by RefSeq, Oct 2015]
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Genomic context

Location:
6p22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (25881926..25882416, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (25747742..25748232, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (25882154..25882644, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 1 Neighboring gene solute carrier family 17 member 4 Neighboring gene uncharacterized LOC124901285 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16996 Neighboring gene solute carrier family 17 member 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:25882461-25882975 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:25898344-25898933 Neighboring gene H2B histone pseudogene 5 Neighboring gene solute carrier family 17 member 2

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • H2A histone family, member T, pseudogene
  • histone 1, H2a, pseudogene 2
  • histone cluster 1 H2A pseudogene 2
  • histone cluster 1, H2a, pseudogene 2
  • histone family member pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002685.2 

    Range
    101..591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    25881926..25882416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    25747742..25748232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)