U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ANKRD36BP1 ankyrin repeat domain 36B pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 84832, updated on 16-Jan-2024

Summary

Go to the top of the page Help
Official Symbol
ANKRD36BP1provided by HGNC
Official Full Name
ankyrin repeat domain 36B pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:28169
See related
Ensembl:ENSG00000293109 AllianceGenome:HGNC:28169
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ANKRD26L1; ANKRD36BL1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
1q24.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (168245565..168247430, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (167597066..167598932, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (168214803..168216668, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene ribosomal protein L34 pseudogene 1 Neighboring gene CRISPRi-validated cis-regulatory element chr1.9777 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:168195163-168195896 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2058 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2059 Neighboring gene SFT2 domain containing 2 Neighboring gene RNA, U6 small nuclear 1310, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:168239605-168240105 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:168254423-168254924 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:168260049-168260620 Neighboring gene T-box transcription factor 19

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gsk3β and Tomm20 are substrates of the SCFFbxo7/PARK15 ubiquitin ligase associated with Parkinson's disease. Teixeira FR, et al. Biochem J, 2016 Oct 15. PMID 27503909, Free PMC Article
  2. Towards a proteome-scale map of the human protein-protein interaction network. Rual JF, et al. Nature, 2005 Oct 20. PMID 16189514
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. Oláh J, et al. J Biol Chem, 2011 Sep 30. PMID 21832049, Free PMC Article
  4. VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Yue Y, et al. Cell Discov, 2018. PMID 29507755, Free PMC Article
  5. A proteome-scale map of the human interactome network. Rolland T, et al. Cell, 2014 Nov 20. PMID 25416956, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Other Names

  • ankyrin repeat domain 26-like 1
  • ankyrin repeat domain 36B-like 1 (pseudogene)

Clone Names

  • MGC12538

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026844.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC007072, DA219755, DA246884, DB229590
    Related
    ENST00000358576.4

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    168245565..168247430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    167597066..167598932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032746.1: Suppressed sequence

    Description
    NM_032746.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96IX9.1 GenPept UniProtKB/Swiss-Prot:Q96IX9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Miscellaneous