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GNL3LP1 G protein nucleolar 3 like pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 80060, updated on 10-Oct-2023

Summary

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Official Symbol
GNL3LP1provided by HGNC
Official Full Name
G protein nucleolar 3 like pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:25733
See related
Ensembl:ENSG00000215032 AllianceGenome:HGNC:25733
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GNL3LP
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Genomic context

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Location:
5q12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (60891676..60893662, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (61708060..61710046, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (60187503..60189489, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr5:60065221-60065722 Neighboring gene keratin 8 pseudogene 31 Neighboring gene ELOVL fatty acid elongase 7 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16039 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16040 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16041 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16042 Neighboring gene ERCC excision repair 8, CSA ubiquitin ligase complex subunit Neighboring gene ERCC8 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22588 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • guanine nucleotide binding protein-like 3 (nucleolar)-like pseudogene 1

Clone Names

  • FLJ12595

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005649.3 

    Range
    101..2087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    60891676..60893662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    61708060..61710046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_024994.1: Suppressed sequence

    Description
    NM_024994.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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