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OR5H8 olfactory receptor family 5 subfamily H member 8 (gene/pseudogene) [ Homo sapiens (human) ]

Gene ID: 79289, updated on 23-Nov-2023

Summary

Official Symbol
OR5H8provided by HGNC
Official Full Name
olfactory receptor family 5 subfamily H member 8 (gene/pseudogene)provided by HGNC
Primary source
HGNC:HGNC:14773
See related
AllianceGenome:HGNC:14773
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OR3-7; OR5H8P
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. This olfactory receptor gene is a segregating pseudogene, where some individuals have an allele that encodes a functional olfactory receptor, while other individuals have an allele encoding a protein that is predicted to be non-functional. [provided by RefSeq, Jan 2017]
Annotation information
Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
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Genomic context

Location:
3q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (98311913..98312840)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (101015617..101016544)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (98030757..98031684)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373999 Neighboring gene olfactory receptor family 5 subfamily H member 6 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:98010491-98010992 Neighboring gene olfactory receptor family 5 subfamily H member 2 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:98043469-98044668 Neighboring gene NANOG hESC enhancer GRCh37_chr3:98045278-98045876 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14554 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:98047305-98048042 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:98048043-98048779 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20135 Neighboring gene olfactory receptor family 5 subfamily K member 4 Neighboring gene uncharacterized LOC105374000

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • olfactory receptor OR3-7 pseudogene
  • olfactory receptor, family 5, subfamily H, member 8 pseudogene

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002227.2 

    Range
    101..1028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    98311913..98312840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    101015617..101016544
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)