U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC25A20P1 solute carrier family 25 member 20 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 789, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
SLC25A20P1provided by HGNC
Official Full Name
solute carrier family 25 member 20 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:1422
See related
AllianceGenome:HGNC:1422
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CACTP; SLC25A20P
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
6p12.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (52246374..52248104)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (52085127..52086856)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (52111172..52112902)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724327 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92072 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24666 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24667 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24668 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24669 Neighboring gene uncharacterized LOC124901328 Neighboring gene interleukin 17F Neighboring gene ReSE screen-validated silencer GRCh37_chr6:52129168-52129587 Neighboring gene minichromosome maintenance complex component 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24670 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24671 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17279 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24672 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17280 Neighboring gene uncharacterized LOC124901329 Neighboring gene Sharpr-MPRA regulatory region 10632 Neighboring gene Sharpr-MPRA regulatory region 10484 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24673

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 pseudogene 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001087.5 

    Range
    101..1831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    52246374..52248104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    52085127..52086856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases