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4930404H24Rik RIKEN cDNA 4930404H24 gene [ Mus musculus (house mouse) ]

Gene ID: 78151, updated on 8-Feb-2024

Summary

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Official Symbol
4930404H24Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930404H24 geneprovided by MGI
Primary source
MGI:MGI:1925401
See related
AllianceGenome:MGI:1925401
Gene type
unknown
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more

Genomic context

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See 4930404H24Rik in Genome Data Viewer
Location:
2 H1; 2 75.51 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (153334535..153347258)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (153492615..153505226)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_06089 Neighboring gene STARR-positive B cell enhancer ABC_E7870 Neighboring gene ASXL transcriptional regulator 1 Neighboring gene predicted gene 14472 Neighboring gene nucleolar protein 4-like Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:153351610-153351793 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:153351903-153352104 Neighboring gene STARR-seq mESC enhancer starr_06100 Neighboring gene STARR-seq mESC enhancer starr_06102 Neighboring gene COMM domain containing 7 Neighboring gene DNA methyltransferase 3B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    153334535..153347258
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004940977.1 RNA Sequence

  2. XR_004940978.1 RNA Sequence

  3. XR_375139.5 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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