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LOC780529 uncharacterized LOC780529 [ Homo sapiens (human) ]

Gene ID: 780529, updated on 10-Oct-2023

Summary

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Gene symbol
LOC780529
Gene description
uncharacterized LOC780529
See related
Ensembl:ENSG00000271776
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q31.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (78596122..78599619)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (77821845..77825342)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (79170257..79173754)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene OBI1 antisense RNA 1 Neighboring gene ribosomal protein L31 pseudogene 54 Neighboring gene elongin C pseudogene 23 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:79169924-79170652 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5424 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:79180755-79181616 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:79181617-79182476 Neighboring gene POU class 4 homeobox 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:79231698-79232658 Neighboring gene ORC ubiquitin ligase 1 Neighboring gene uncharacterized LOC105370272 Neighboring gene ribosomal protein L21 pseudogene 111

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_158457.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL445209
    Related
    ENST00000607269.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    78596122..78599619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    77821845..77825342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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