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Krtap17-1 keratin associated protein 17-1 [ Mus musculus (house mouse) ]

Gene ID: 77914, updated on 5-Mar-2024

Summary

Official Symbol
Krtap17-1provided by MGI
Official Full Name
keratin associated protein 17-1provided by MGI
Primary source
MGI:MGI:1925164
See related
Ensembl:ENSMUSG00000078252 AllianceGenome:MGI:1925164
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A030006P16Rik
Summary
Is expressed in several structures, including foregut; male reproductive gland or organ; respiratory system; thymus; and urinary system. Orthologous to human KRTAP17-1 (keratin associated protein 17-1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
11 D; 11 63.34 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (99884058..99884820, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (99993232..99993994, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 29-1 Neighboring gene keratin associated protein 16-1 Neighboring gene STARR-seq mESC enhancer starr_30710 Neighboring gene keratin 33A Neighboring gene keratin 33B

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Markers

Clone Names

  • A030006P16Rik

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 

General protein information

Preferred Names
keratin-associated protein 17-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099774.2NP_001093244.1  keratin-associated protein 17-1

    See identical proteins and their annotated locations for NP_001093244.1

    Status: VALIDATED

    Source sequence(s)
    AL592545
    Consensus CDS
    CCDS36330.1
    UniProtKB/TrEMBL
    A2A5X6
    Related
    ENSMUSP00000100670.2, ENSMUST00000105049.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    99884058..99884820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)