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E130102H24Rik RIKEN cDNA E130102H24 gene [ Mus musculus (house mouse) ]

Gene ID: 77866, updated on 8-Feb-2024

Summary

Official Symbol
E130102H24Rikprovided by MGI
Official Full Name
RIKEN cDNA E130102H24 geneprovided by MGI
Primary source
MGI:MGI:1925116
See related
Ensembl:ENSMUSG00000086782 AllianceGenome:MGI:1925116
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in cerebellum adult (RPKM 7.9), bladder adult (RPKM 6.9) and 26 other tissues See more
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Genomic context

Location:
4 C6; 4 46.66 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (101203721..101213445, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (101346524..101356248, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr4:100965565-100965866 Neighboring gene STARR-seq mESC enhancer starr_10897 Neighboring gene predicted gene 12796 Neighboring gene STARR-seq mESC enhancer starr_10898 Neighboring gene predicted gene, 54243 Neighboring gene predicted gene, 57839 Neighboring gene STARR-seq mESC enhancer starr_10899 Neighboring gene RIKEN cDNA 0610043K17 gene Neighboring gene microRNA 101a Neighboring gene ribosomal protein L9 pseudogene Neighboring gene STARR-seq mESC enhancer starr_10903 Neighboring gene adenylate kinase 4 Neighboring gene STARR-seq mESC enhancer starr_10910

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040708.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI853970, AK021368, AL645668
    Related
    ENSMUST00000144604.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    101203721..101213445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)