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Dmrta2os doublesex and mab-3 related transcription factor like family A2, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 77453, updated on 8-Feb-2024

Summary

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Official Symbol
Dmrta2osprovided by MGI
Official Full Name
doublesex and mab-3 related transcription factor like family A2, opposite strandprovided by MGI
Primary source
MGI:MGI:1924703
See related
AllianceGenome:MGI:1924703
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
3010003L10Rik
Expression
Biased expression in CNS E11.5 (RPKM 1.7), CNS E14 (RPKM 1.0) and 8 other tissues See more
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Genomic context

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See Dmrta2os in Genome Data Viewer
Location:
4 C7; 4 51.37 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (109833941..109836595, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (109973179..109979624, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase inhibitor 2C Neighboring gene Fas-associated factor 1 Neighboring gene STARR-seq mESC enhancer starr_11075 Neighboring gene STARR-seq mESC enhancer starr_11076 Neighboring gene doublesex and mab-3 related transcription factor like family A2 Neighboring gene STARR-seq mESC enhancer starr_11077 Neighboring gene STARR-seq mESC enhancer starr_11078 Neighboring gene predicted gene, 33070 Neighboring gene ELAV like RNA binding protein 4 Neighboring gene predicted gene, 54251

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Dmrta2 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    109833941..109836595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942256.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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