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Morn1 MORN repeat containing 1 [ Mus musculus (house mouse) ]

Gene ID: 76866, updated on 5-Mar-2024

Summary

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Official Symbol
Morn1provided by MGI
Official Full Name
MORN repeat containing 1provided by MGI
Primary source
MGI:MGI:1924116
See related
Ensembl:ENSMUSG00000029049 AllianceGenome:MGI:1924116
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2900057D20Rik; 4930417P05Rik
Summary
Orthologous to human MORN1 (MORN repeat containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis adult (RPKM 2.6), cerebellum adult (RPKM 1.1) and 26 other tissues See more
Orthologs
human all
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Genomic context

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Location:
4 E2; 4 86.17 cM
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (155167771..155229964)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (155083643..155145507)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene phospholipase C, eta 2 Neighboring gene STARR-positive B cell enhancer ABC_E10295 Neighboring gene STARR-positive B cell enhancer ABC_E1295 Neighboring gene peroxisomal biogenesis factor 10 Neighboring gene retention in endoplasmic reticulum sorting receptor 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:154500916-154501099 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:154524494-154524677 Neighboring gene STARR-positive B cell enhancer mm9_chr4:154536903-154537203 Neighboring gene STARR-seq mESC enhancer starr_12252 Neighboring gene ski sarcoma viral oncogene homolog (avian) Neighboring gene STARR-seq mESC enhancer starr_12254 Neighboring gene predicted gene, 42364

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
  2. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (2) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
MORN repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081100.1 → NP_001074569.1  MORN repeat-containing protein 1 isoform 1

    See identical proteins and their annotated locations for NP_001074569.1

    Status: VALIDATED

    Source sequence(s)
    AL670413
    Consensus CDS
    CCDS38991.1
    UniProtKB/TrEMBL
    A2RTS7
    Related
    ENSMUSP00000030915.5, ENSMUST00000030915.11
    Conserved Domains (3) summary
    smart00698
    Location:131 → 151
    MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
    COG4642
    Location:83 → 213
    COG4642; Uncharacterized conserved protein [Function unknown]
    pfam02493
    Location:155 → 177
    MORN; MORN repeat

  2. NM_001356327.1 → NP_001343256.1  MORN repeat-containing protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK045316, AK148312, AL670413
    Related
    ENSMUST00000155375.8
    Conserved Domains (1) summary
    cl27415
    Location:1 → 108
    COG4642; Uncharacterized conserved protein [Function unknown]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    155167771..155229964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030253897.2 → XP_030109757.1  MORN repeat-containing protein 1 isoform X4

  2. XM_030253899.2 → XP_030109759.1  MORN repeat-containing protein 1 isoform X11

  3. XM_030253894.2 → XP_030109754.1  MORN repeat-containing protein 1 isoform X1

  4. XM_030253895.2 → XP_030109755.1  MORN repeat-containing protein 1 isoform X2

  5. XM_030253896.2 → XP_030109756.1  MORN repeat-containing protein 1 isoform X3

  6. XM_030253898.2 → XP_030109758.1  MORN repeat-containing protein 1 isoform X5

  7. XM_006539262.4 → XP_006539325.1  MORN repeat-containing protein 1 isoform X7

    Conserved Domains (1) summary
    PLN03185
    Location:5 → 192
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  8. XM_006539261.4 → XP_006539324.1  MORN repeat-containing protein 1 isoform X6

    Conserved Domains (1) summary
    COG4642
    Location:38 → 151
    COG4642; Uncharacterized conserved protein [Function unknown]

  9. XM_006539263.4 → XP_006539326.1  MORN repeat-containing protein 1 isoform X8

    Conserved Domains (1) summary
    PLN03185
    Location:5 → 171
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  10. XM_036164540.1 → XP_036020433.1  MORN repeat-containing protein 1 isoform X9

    Conserved Domains (1) summary
    PLN03185
    Location:5 → 192
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  11. XM_030253902.1 → XP_030109762.1  MORN repeat-containing protein 1 isoform X17

  12. XM_030253900.1 → XP_030109760.1  MORN repeat-containing protein 1 isoform X14

    Conserved Domains (1) summary
    PLN03185
    Location:1 → 108
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  13. XM_006539267.5 → XP_006539330.1  MORN repeat-containing protein 1 isoform X12

    Conserved Domains (1) summary
    PLN03185
    Location:1 → 108
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  14. XM_006539269.5 → XP_006539332.1  MORN repeat-containing protein 1 isoform X15

    See identical proteins and their annotated locations for XP_006539332.1

  15. XM_006539268.5 → XP_006539331.1  MORN repeat-containing protein 1 isoform X13

  16. XM_006539270.2 → XP_006539333.1  MORN repeat-containing protein 1 isoform X15

    See identical proteins and their annotated locations for XP_006539333.1

  17. XM_006539271.1 → XP_006539334.1  MORN repeat-containing protein 1 isoform X15

    See identical proteins and their annotated locations for XP_006539334.1

  18. XM_017320446.2 → XP_017175935.1  MORN repeat-containing protein 1 isoform X17

  19. XM_030253901.1 → XP_030109761.1  MORN repeat-containing protein 1 isoform X17

  20. XM_017320447.2 → XP_017175936.1  MORN repeat-containing protein 1 isoform X17

  21. XM_017320444.2 → XP_017175933.1  MORN repeat-containing protein 1 isoform X16

  22. XM_006539275.2 → XP_006539338.1  MORN repeat-containing protein 1 isoform X17

    See identical proteins and their annotated locations for XP_006539338.1

  23. XM_006539273.2 → XP_006539336.1  MORN repeat-containing protein 1 isoform X16

    See identical proteins and their annotated locations for XP_006539336.1

  24. XM_017320443.1 → XP_017175932.1  MORN repeat-containing protein 1 isoform X15

  25. XM_017320441.1 → XP_017175930.1  MORN repeat-containing protein 1 isoform X10

    Conserved Domains (1) summary
    COG4642
    Location:59 → 127
    COG4642; Uncharacterized conserved protein [Function unknown]

RNA

  1. XR_003955051.2 RNA Sequence

  2. XR_003955052.2 RNA Sequence

  3. XR_003955047.2 RNA Sequence

  4. XR_003955041.2 RNA Sequence

  5. XR_003955043.2 RNA Sequence

  6. XR_003955048.2 RNA Sequence

  7. XR_003955042.2 RNA Sequence

  8. XR_003955037.2 RNA Sequence

  9. XR_003955040.2 RNA Sequence

  10. XR_003955038.2 RNA Sequence

  11. XR_004942009.1 RNA Sequence

  12. XR_003955044.2 RNA Sequence

  13. XR_003955046.2 RNA Sequence

  14. XR_003955045.2 RNA Sequence

  15. XR_003955049.2 RNA Sequence

  16. XR_003955050.2 RNA Sequence

  17. XR_001784216.2 RNA Sequence

  18. XR_003955039.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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