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Srrm4os serine/arginine repetitive matrix 4, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 76798, updated on 8-Feb-2024

Summary

Official Symbol
Srrm4osprovided by MGI
Official Full Name
serine/arginine repetitive matrix 4, opposite strandprovided by MGI
Primary source
MGI:MGI:1924048
See related
Ensembl:ENSMUSG00000086219 AllianceGenome:MGI:1924048
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2410137F16Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
5 F; 5 56.45 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (116576781..116603546)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (116438722..116465487)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_14153 Neighboring gene predicted gene, 36841 Neighboring gene heat shock protein 8 Neighboring gene predicted gene, 42009 Neighboring gene serine/arginine repetitive matrix 4 Neighboring gene STARR-seq mESC enhancer starr_14160 Neighboring gene glutathione S-transferase mu 2 (muscle), pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_14161 Neighboring gene STARR-seq mESC enhancer starr_14162 Neighboring gene predicted gene, 29843

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Other Names

  • Srrm4 opposite strand transcript

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015595.3 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC115972, AK049160
    Related
    ENSMUST00000126959.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    116576781..116603546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)