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1700041M19Rik RIKEN cDNA 1700041M19 gene [ Mus musculus (house mouse) ]

Gene ID: 76601, updated on 8-Feb-2024

Summary

Official Symbol
1700041M19Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700041M19 geneprovided by MGI
Primary source
MGI:MGI:1923851
See related
Ensembl:ENSMUSG00000100857 AllianceGenome:MGI:1923851
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 10.8) See more
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Genomic context

See 1700041M19Rik in Genome Data Viewer
Location:
16; 16 C3.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (76801116..76807769, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (77004228..77010881, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700063K16 gene Neighboring gene STARR-seq mESC enhancer starr_41290 Neighboring gene V-type proton ATPase subunit F pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E10917 Neighboring gene STARR-seq mESC enhancer starr_41291 Neighboring gene ribosomal protein L19 pseudogene Neighboring gene STARR-seq mESC enhancer starr_41292 Neighboring gene STARR-seq mESC enhancer starr_41293 Neighboring gene STARR-positive B cell enhancer ABC_E10918 Neighboring gene ubiquitin specific peptidase 25 Neighboring gene STARR-seq mESC enhancer starr_41294 Neighboring gene STARR-seq mESC enhancer starr_41295 Neighboring gene predicted gene, 31258

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040573.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AK006678, AK077115
    Related
    ENSMUST00000190908.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    76801116..76807769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)