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Oga O-GlcNAcase [ Mus musculus (house mouse) ]

Gene ID: 76055, updated on 21-Apr-2024

Summary

Official Symbol
Ogaprovided by MGI
Official Full Name
O-GlcNAcaseprovided by MGI
Primary source
MGI:MGI:1932139
See related
Ensembl:ENSMUSG00000025220 AllianceGenome:MGI:1932139
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hy5; Mgea5; Ncoat
Summary
Predicted to enable beta-N-acetylglucosaminidase activity and histone acetyltransferase activity. Predicted to be involved in several processes, including positive regulation of mitochondrial depolarization; positive regulation of transport; and regulation of cellular protein metabolic process. Predicted to be located in cytosol and mitochondrion. Is expressed in brain ventricular layer; retina inner nuclear layer; retina nuclear layer; and retina outer nuclear layer. Orthologous to human OGA (O-GlcNAcase). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E18 (RPKM 28.1), CNS E11.5 (RPKM 27.8) and 26 other tissues See more
Orthologs
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Genomic context

Location:
19 C3; 19 38.75 cM
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (45738698..45772274, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (45750255..45783644, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene Fgf8 enhancer CR1 Neighboring gene STARR-positive B cell enhancer ABC_E11033 Neighboring gene fibroblast growth factor 8 Neighboring gene nucleoplasmin 3 Neighboring gene STARR-positive B cell enhancer ABC_E4286 Neighboring gene STARR-seq mESC enhancer starr_46285 Neighboring gene Kv channel-interacting protein 2 Neighboring gene STARR-seq mESC enhancer starr_46286 Neighboring gene armadillo-like helical domain containing 3 Neighboring gene STARR-positive B cell enhancer ABC_E7665 Neighboring gene ribosomal protein L21 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (5)  1 citation
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • mKIAA0679, 2810009A20Rik, 4833427O07Rik, 5830447M11Rik

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in dATP metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in glycoprotein metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cardiac muscle adaptation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of protein glycosylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of calcium ion transport ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of calcium ion transport into cytosol ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell killing ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of glucose import ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of growth hormone secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of insulin secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of mitochondrial depolarization ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein-containing complex disassembly ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of proteolysis ISO
Inferred from Sequence Orthology
more info
 
involved_in protein deglycosylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein targeting to membrane ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein O-GlcNAcase
Names
N-acetyl-beta-D-glucosaminidase
N-acetyl-beta-glucosaminidase
beta-N-acetylhexosaminidase
beta-hexosaminidase
bifunctional protein NCOAT
meningioma expressed antigen 5 (hyaluronidase)
meningioma-expressed antigen 5
nuclear cytoplasmic O-GlcNAcase and acetyltransferase
NP_001390278.1
NP_001390280.1
NP_001390281.1
NP_001390282.1
NP_076288.1
XP_017173794.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001403349.1NP_001390278.1  protein O-GlcNAcase isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC149086
  2. NM_001403351.1NP_001390280.1  protein O-GlcNAcase isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC149086
  3. NM_001403352.1NP_001390281.1  protein O-GlcNAcase isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC149086
  4. NM_001403353.1NP_001390282.1  protein O-GlcNAcase isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC149086
  5. NM_023799.5NP_076288.1  protein O-GlcNAcase isoform 1

    See identical proteins and their annotated locations for NP_076288.1

    Status: VALIDATED

    Source sequence(s)
    AC149086
    Consensus CDS
    CCDS29866.1
    UniProtKB/Swiss-Prot
    Q3ULY7, Q6ZQ71, Q8BK05, Q8BTT2, Q8CFX2, Q9CSJ4, Q9CUR7, Q9EQQ9
    Related
    ENSMUSP00000026243.4, ENSMUST00000026243.5
    Conserved Domains (1) summary
    pfam07555
    Location:62338
    NAGidase; beta-N-acetylglucosaminidase

RNA

  1. NR_151594.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC149086

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    45738698..45772274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017318305.3XP_017173794.2  protein O-GlcNAcase isoform X2

    UniProtKB/TrEMBL
    Q05CX1
    Conserved Domains (1) summary
    pfam07555
    Location:100376
    NAGidase; beta-N-acetylglucosaminidase

RNA

  1. XR_004940181.1 RNA Sequence