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Tex26 testis expressed 26 [ Mus musculus (house mouse) ]

Gene ID: 75860, updated on 5-Mar-2024

Summary

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Official Symbol
Tex26provided by MGI
Official Full Name
testis expressed 26provided by MGI
Primary source
MGI:MGI:1923110
See related
Ensembl:ENSMUSG00000029660 AllianceGenome:MGI:1923110
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930588N13Rik
Summary
Predicted to be active in cytoplasm. Orthologous to human TEX26 (testis expressed 26). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 5.9) and lung adult (RPKM 0.3) See more
Orthologs
human all
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Genomic context

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Location:
5 G3; 5 89.18 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149363112..149394443)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (149439651..149470979)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11310 Neighboring gene cDNA sequence BC028471 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:150230952-150231169 Neighboring gene mesenteric estrogen dependent adipogenesis Neighboring gene RIKEN cDNA 4933425D22 gene Neighboring gene STARR-seq mESC enhancer starr_14933 Neighboring gene predicted gene 15997 Neighboring gene WD40 repeat domain 95 Neighboring gene predicted gene, 54316 Neighboring gene STARR-seq mESC enhancer starr_14938 Neighboring gene predicted gene, 35763

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Database resources of the National Center for Biotechnology Information. Wheeler DL, et al. Nucleic Acids Res, 2001 Jan 1. PMID 11125038, Free PMC Article
  2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
testis-expressed protein 26
Names
testis-expressed sequence 26 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310763.2 → NP_001297692.1  testis-expressed protein 26 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC114420
    Consensus CDS
    CCDS80476.1
    UniProtKB/TrEMBL
    A0A0M3HEP4, B7ZN43
    Related
    ENSMUSP00000031667.6, ENSMUST00000031667.8

  2. NM_001310764.2 → NP_001297693.1  testis-expressed protein 26 isoform 3

    See identical proteins and their annotated locations for NP_001297693.1

    Status: VALIDATED

    Source sequence(s)
    AC114420
    Consensus CDS
    CCDS80477.1
    UniProtKB/TrEMBL
    A0A0J9YTV2

  3. NM_001310765.2 → NP_001297694.1  testis-expressed protein 26 isoform 3

    See identical proteins and their annotated locations for NP_001297694.1

    Status: VALIDATED

    Source sequence(s)
    AC114420
    Consensus CDS
    CCDS80477.1
    UniProtKB/TrEMBL
    A0A0J9YTV2
    Related
    ENSMUSP00000143863.2, ENSMUST00000202920.4

  4. NM_029464.3 → NP_083740.1  testis-expressed protein 26 isoform 1

    See identical proteins and their annotated locations for NP_083740.1

    Status: VALIDATED

    Source sequence(s)
    AC114420
    Consensus CDS
    CCDS51707.1
    UniProtKB/Swiss-Prot
    Q0VB26
    UniProtKB/TrEMBL
    B7ZN43
    Related
    ENSMUSP00000143851.2, ENSMUST00000201683.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    149363112..149394443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006504946.5 → XP_006505009.1  testis-expressed protein 26 isoform X2

    UniProtKB/TrEMBL
    B7ZN43

  2. XM_006504945.5 → XP_006505008.1  testis-expressed protein 26 isoform X1

    UniProtKB/TrEMBL
    B7ZN43

  3. XM_036165588.1 → XP_036021481.1  testis-expressed protein 26 isoform X3

    UniProtKB/TrEMBL
    Q8C314

RNA

  1. XR_001784754.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0VB26.1 GenPept UniProtKB/Swiss-Prot:Q0VB26

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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