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Mageh1 MAGE family member H1 [ Mus musculus (house mouse) ]

Gene ID: 75625, updated on 5-Mar-2024

Summary

Official Symbol
Mageh1provided by MGI
Official Full Name
MAGE family member H1provided by MGI
Primary source
MGI:MGI:1922875
See related
Ensembl:ENSMUSG00000047238 AllianceGenome:MGI:1922875
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
APR1; APR-1; 2010107K23Rik
Summary
Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; peripheral nervous system ganglion; and sensory organ. Orthologous to human MAGEH1 (MAGE family member H1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
X F3; X 68.46 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (151819162..151820559, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (153036166..153037563, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7A, pseudogene 12 Neighboring gene ribosomal protein S7, pseudogene 3 Neighboring gene STARR-seq mESC enhancer starr_48108 Neighboring gene ubiquitin specific protease 51 Neighboring gene RIKEN cDNA 9530051G07 gene Neighboring gene predicted pseudogene 5396

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
melanoma-associated antigen H1
Names
MAGE-H1 antigen
melanoma antigen, family H, 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023788.3NP_076277.1  melanoma-associated antigen H1

    See identical proteins and their annotated locations for NP_076277.1

    Status: VALIDATED

    Source sequence(s)
    BC051935, CD363769
    Consensus CDS
    CCDS30478.1
    UniProtKB/Swiss-Prot
    Q99PB0, Q9NWG9
    UniProtKB/TrEMBL
    Q3UKU3
    Related
    ENSMUSP00000057157.4, ENSMUST00000051484.5
    Conserved Domains (1) summary
    pfam01454
    Location:55169
    MAGE; MAGE family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    151819162..151820559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)