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Ttc32 tetratricopeptide repeat domain 32 [ Mus musculus (house mouse) ]

Gene ID: 75516, updated on 5-Mar-2024

Summary

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Official Symbol
Ttc32provided by MGI
Official Full Name
tetratricopeptide repeat domain 32provided by MGI
Primary source
MGI:MGI:1922766
See related
Ensembl:ENSMUSG00000066637 AllianceGenome:MGI:1922766
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700013G20Rik
Summary
Orthologous to human TTC32 (tetratricopeptide repeat domain 32). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 3.3), kidney adult (RPKM 2.8) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
12 A1.1; 12 3.98 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (9079997..9086394)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (9029997..9036394)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene matrilin 3 Neighboring gene WD repeat domain 35 Neighboring gene STARR-seq mESC enhancer starr_31525 Neighboring gene predicted gene, 46323 Neighboring gene predicted gene 7099

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
tetratricopeptide repeat protein 32
Names
TPR repeat protein 32

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029321.2 → NP_083597.1  tetratricopeptide repeat protein 32

    See identical proteins and their annotated locations for NP_083597.1

    Status: PROVISIONAL

    Source sequence(s)
    AC110376, AC132572
    Consensus CDS
    CCDS25808.1
    UniProtKB/Swiss-Prot
    Q9DAC7
    Related
    ENSMUSP00000082891.2, ENSMUST00000085741.2
    Conserved Domains (3) summary
    sd00006
    Location:55 → 83
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:92 → 122
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:55 → 120
    TPR_11; TPR repeat

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    9079997..9086394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9DAC7.1 GenPept UniProtKB/Swiss-Prot:Q9DAC7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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