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Cfap276 cilia and flagella associated protein 276 [ Mus musculus (house mouse) ]

Gene ID: 75504, updated on 11-Apr-2024

Summary

Official Symbol
Cfap276provided by MGI
Official Full Name
cilia and flagella associated protein 276provided by MGI
Primary source
MGI:MGI:1922754
See related
Ensembl:ENSMUSG00000027886 AllianceGenome:MGI:1922754
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700013F07Rik
Summary
Predicted to enable heme binding activity and heme transmembrane transporter activity. Predicted to be involved in heme export. Predicted to be located in cytoplasm and cytoskeleton. Is expressed in several structures, including gastrocnemius muscle; lung; and nervous system. Used to study Charcot-Marie-Tooth disease intermediate type. Orthologous to human CFAP276 (cilia and flagella associated protein 276). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 240.4) See more
Orthologs
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Genomic context

Location:
3 F3; 3 47.27 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (108444900..108452013)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (108537584..108544697)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene seryl-tRNA synthetase 1 Neighboring gene STARR-positive B cell enhancer mm9_chr3:108248013-108248314 Neighboring gene predicted gene, 22942 Neighboring gene STARR-seq mESC enhancer starr_08688 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator 1 Neighboring gene predicted gene, 23336 Neighboring gene STARR-seq mESC enhancer starr_08689 Neighboring gene STARR-positive B cell enhancer ABC_E4574 Neighboring gene STARR-positive B cell enhancer ABC_E2679 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:108365309-108365496 Neighboring gene small Cajal body-specific RNA 2 Neighboring gene transmembrane protein 167B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General protein information

Preferred Names
cilia- and flagella-associated protein 276
Names
protein C1orf194 homolog
protein CFAP276
uncharacterized protein C1orf194 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029314.1NP_083590.1  cilia- and flagella-associated protein 276

    See identical proteins and their annotated locations for NP_083590.1

    Status: PROVISIONAL

    Source sequence(s)
    BC116223
    Consensus CDS
    CCDS51046.1
    UniProtKB/Swiss-Prot
    Q9DAD0
    Related
    ENSMUSP00000029485.6, ENSMUST00000029485.6
    Conserved Domains (1) summary
    pfam12494
    Location:36124
    DUF3695; Protein of unknown function (DUF3695)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    108444900..108452013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)