Slc35f4 solute carrier family 35, member F4 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Slc35f4provided by MGI
Official Full Name: solute carrier family 35, member F4provided by MGI
Primary source: MGI:MGI:1922538
See related: Ensembl:ENSMUSG00000021852 AllianceGenome:MGI:1922538
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 4930550L21Rik
Summary: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC35F4 (solute carrier family 35 member F4). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in frontal lobe adult (RPKM 4.5), cortex adult (RPKM 3.0) and 4 other tissues See more
Orthologs: human all
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Genomic context

Location:: 14 C1; 14 25.52 cM

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	14	NC_000080.7 (49535976..49763354, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	14	NC_000080.6 (49298519..49525837, complement)

Chromosome 14 - NC_000080.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

D14Mit130 (e-PCR), detects polymorphism
- UniSTS:127236

Slc35f4 (e-PCR), detects polymorphism
- UniSTS:547097

NoName (e-PCR)
- UniSTS:493403

D14Mit258 (e-PCR), detects polymorphism
- UniSTS:127369

D14Mit101 (e-PCR), detects polymorphism
- UniSTS:127202

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: solute carrier family 35 member F4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_029238.2 → NP_083514.1 solute carrier family 35 member F4

See identical proteins and their annotated locations for NP_083514.1

Status: PROVISIONAL

Source sequence(s)

AK034308

Consensus CDS

CCDS26997.1

UniProtKB/Swiss-Prot

B8JJY8, Q8BL81, Q8BXC4, Q8BZK4, Q9JJG8

UniProtKB/TrEMBL

B2RSS2

Related

ENSMUSP00000073972.5, ENSMUST00000074368.11

Conserved Domains (1) summary

COG0697
Location:238 → 438

RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]