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Bltp3b bridge-like lipid transfer protein family member 3B [ Mus musculus (house mouse) ]

Gene ID: 75089, updated on 5-Mar-2024

Summary

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Official Symbol
Bltp3bprovided by MGI
Official Full Name
bridge-like lipid transfer protein family member 3Bprovided by MGI
Primary source
MGI:MGI:2442888
See related
Ensembl:ENSMUSG00000019951 AllianceGenome:MGI:2442888
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Uhrf1bp1l; mKIAA0701; 2010319N22Rik; 4930506D01Rik; E030041M21Rik
Summary
Predicted to enable GARP complex binding activity and protein homodimerization activity. Predicted to be located in cytosol and early endosome. Orthologous to human UHRF1BP1L (UHRF1 binding protein 1 like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis adult (RPKM 7.5), frontal lobe adult (RPKM 6.5) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
10 C2; 10 45.22 cM
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (89580830..89655753)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (89744968..89819891)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2334 Neighboring gene STARR-positive B cell enhancer ABC_E6899 Neighboring gene STARR-seq mESC enhancer starr_27525 Neighboring gene predicted gene, 30963 Neighboring gene ARP6 actin-related protein 6 Neighboring gene STARR-seq mESC enhancer starr_27526 Neighboring gene predicted gene, 31090 Neighboring gene predicted gene, 26180 Neighboring gene SEC61 translocon subunit gamma, pseudogene 1 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 1B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, et al. DNA Res, 2002 Oct 31. PMID 12465718
  2. Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders. Li J, et al. Nat Neurosci, 2017 Aug. PMID 28671696, Free PMC Article
  3. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
  4. BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING). Motani K, et al. J Biol Chem, 2020 Aug 7. PMID 32554809, Free PMC Article
  5. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • KIAA0701

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GARP complex binding ISO
Inferred from Sequence Orthology
more info
  
enables lipid transfer activity ISO
Inferred from Sequence Orthology
more info
  
enables molecular_function ND
No biological Data available
more info
  
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in early endosome to Golgi transport ISO
Inferred from Sequence Orthology
more info
  
involved_in intermembrane lipid transfer ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol ISO
Inferred from Sequence Orthology
more info
  
located_in early endosome ISO
Inferred from Sequence Orthology
more info
  
located_in endosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
bridge-like lipid transfer protein family member 3B
Names
UHRF1 (ICBP90) binding protein 1-like
UHRF1-binding protein 1-like
syntaxin-6 Habc-interacting protein of 164 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029166.2 → NP_083442.2  bridge-like lipid transfer protein family member 3B

    See identical proteins and their annotated locations for NP_083442.2

    Status: VALIDATED

    Source sequence(s)
    AC130216, AK015715, AK046432, AK141050, BB529788, BM202084
    Consensus CDS
    CCDS36028.1
    UniProtKB/Swiss-Prot
    A2RSJ4, B2RQV0, E9QMH4, Q8CHD4
    Related
    ENSMUSP00000020112.6, ENSMUST00000020112.7
    Conserved Domains (1) summary
    pfam12624
    Location:3 → 87
    Chorein_N; N-terminal region of Chorein or VPS13

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    89580830..89655753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017314128.2 → XP_017169617.1  bridge-like lipid transfer protein family member 3B isoform X1

    Conserved Domains (1) summary
    pfam12624
    Location:3 → 96
    Chorein_N; N-terminal region of Chorein or VPS13

  2. XM_036156067.1 → XP_036011960.1  bridge-like lipid transfer protein family member 3B isoform X3

    Conserved Domains (1) summary
    pfam12624
    Location:5 → 87
    Chorein_N; N-terminal region of Chorein or VPS13

  3. XM_030245339.1 → XP_030101199.1  bridge-like lipid transfer protein family member 3B isoform X2

    Conserved Domains (1) summary
    pfam12624
    Location:1 → 39
    Chorein_N; N-terminal region of Chorein or VPS13

  4. XM_030245342.2 → XP_030101202.1  bridge-like lipid transfer protein family member 3B isoform X4

  5. XM_006514264.3 → XP_006514327.1  bridge-like lipid transfer protein family member 3B isoform X2

    Conserved Domains (1) summary
    pfam12624
    Location:1 → 39
    Chorein_N; N-terminal region of Chorein or VPS13

  6. XM_036156066.1 → XP_036011959.1  bridge-like lipid transfer protein family member 3B isoform X2

    Conserved Domains (1) summary
    pfam12624
    Location:1 → 39
    Chorein_N; N-terminal region of Chorein or VPS13

  7. XM_017314129.3 → XP_017169618.1  bridge-like lipid transfer protein family member 3B isoform X5

RNA

  1. XR_380453.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A2RSJ4.2 GenPept UniProtKB/Swiss-Prot:A2RSJ4

Gene LinkOut

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