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Cdrt4os1 CMT1A duplicated region transcript 4, opposite strand 1 [ Mus musculus (house mouse) ]

Gene ID: 74884, updated on 8-Feb-2024

Summary

Official Symbol
Cdrt4os1provided by MGI
Official Full Name
CMT1A duplicated region transcript 4, opposite strand 1provided by MGI
Primary source
MGI:MGI:1922134
See related
Ensembl:ENSMUSG00000087604 AllianceGenome:MGI:1922134
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930452L02Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
11 B3; 11 38.84 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (62881279..62894960, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (62990453..63004134, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36614 Neighboring gene CMT1A duplicated region transcript 4, opposite strand 2 Neighboring gene VISTA enhancer mm1530 Neighboring gene CMT1A duplicated region transcript 4 Neighboring gene VISTA enhancer mm62 Neighboring gene predicted gene, 46284 Neighboring gene predicted gene, 36874 Neighboring gene STARR-seq mESC enhancer starr_29723 Neighboring gene tektin 3 Neighboring gene predicted gene, 36926

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Cdrt4 opposite strand transcript 1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126547.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK015448, AK133035, AL592215
    Related
    ENSMUST00000153180.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    62881279..62894960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)