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4933427D14Rik RIKEN cDNA 4933427D14 gene [ Mus musculus (house mouse) ]

Gene ID: 74477, updated on 5-Mar-2024

Summary

Official Symbol
4933427D14Rikprovided by MGI
Official Full Name
RIKEN cDNA 4933427D14 geneprovided by MGI
Primary source
MGI:MGI:1921727
See related
Ensembl:ENSMUSG00000020807 Ensembl:ENSMUSG00000107877 AllianceGenome:MGI:1921727
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MNR; Gm43951; Kiaa0753
Summary
Predicted to be involved in protein localization to centrosome. Predicted to be located in centrosome and cytosol. Predicted to be active in centriolar satellite. Is expressed in several structures, including alimentary system; brain; cardiovascular system; egg cylinder; and genitourinary system. Human ortholog(s) of this gene implicated in Joubert syndrome; asphyxiating thoracic dystrophy; and orofaciodigital syndrome. Orthologous to human KIAA0753 (KIAA0753). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E18 (RPKM 7.6), CNS E14 (RPKM 7.5) and 27 other tissues See more
Orthologs
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Genomic context

See 4933427D14Rik in Genome Data Viewer
Location:
11; 11 B4
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (72044755..72098308, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (72153929..72207482, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9825 Neighboring gene STARR-positive B cell enhancer ABC_E8421 Neighboring gene aryl hydrocarbon receptor-interacting protein-like 1 Neighboring gene PICALM interacting mitotic regulator Neighboring gene PITPNM family member 3 Neighboring gene predicted gene, 46286 Neighboring gene STARR-seq mESC enhancer starr_29899 Neighboring gene RIKEN cDNA 4930563E22 gene Neighboring gene STARR-positive B cell enhancer ABC_E3970 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:72029072-72029181 Neighboring gene predicted gene, 57849 Neighboring gene thioredoxin domain containing 17 Neighboring gene mediator complex subunit 31

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in centriole replication IEA
Inferred from Electronic Annotation
more info
 
involved_in cilium assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in cytosolic ciliogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in protein localization to centrosome IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein localization to centrosome ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in centriolar satellite IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in centriolar satellite ISO
Inferred from Sequence Orthology
more info
 
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001361564.1NP_001348493.1  protein moonraker

    Status: VALIDATED

    Source sequence(s)
    BX119911
    Consensus CDS
    CCDS24979.1
    UniProtKB/Swiss-Prot
    Q6A000, Q80XQ5, Q9CUC0
    UniProtKB/TrEMBL
    A0A0R4J1C3
    Related
    ENSMUSP00000158687.2, ENSMUST00000238653.2
    Conserved Domains (1) summary
    pfam15718
    Location:1954
    MNR; Protein moonraker
  2. NM_028963.3NP_083239.1  protein moonraker

    See identical proteins and their annotated locations for NP_083239.1

    Status: VALIDATED

    Source sequence(s)
    BX119911
    Consensus CDS
    CCDS24979.1
    UniProtKB/Swiss-Prot
    Q6A000, Q80XQ5, Q9CUC0
    UniProtKB/TrEMBL
    A0A0R4J1C3
    Related
    ENSMUSP00000104146.3, ENSMUST00000108506.10
    Conserved Domains (1) summary
    pfam15718
    Location:1954
    MNR; Protein moonraker

RNA

  1. NR_155065.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK016946, AK041396, BC059269, BY133971
  2. NR_155066.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK016946, AK041396, BC059269, BY133971
  3. NR_155067.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC059269, BY133971
    Related
    ENSMUST00000142530.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    72044755..72098308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)