U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Stpg3 sperm tail PG rich repeat containing 3 [ Mus musculus (house mouse) ]

Gene ID: 74472, updated on 3-Apr-2024

Summary

Official Symbol
Stpg3provided by MGI
Official Full Name
sperm tail PG rich repeat containing 3provided by MGI
Primary source
MGI:MGI:1921722
See related
Ensembl:ENSMUSG00000036770 AllianceGenome:MGI:1921722
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933433C11Rik
Summary
Predicted to be active in cytoskeleton. Orthologous to human STPG3 (sperm-tail PG-rich repeat containing 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 72.0) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
2 A3; 2 17.07 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (25102219..25108680, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (25212207..25218707, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E3362 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:25052129-25052238 Neighboring gene torsin family 4, member A Neighboring gene negative elongation factor complex member B Neighboring gene predicted gene, 22572 Neighboring gene ciliary microtubule inner protein 2A Neighboring gene tubulin, beta 4B class IVB Neighboring gene STARR-seq mESC enhancer starr_03963 Neighboring gene solute carrier family 34 (sodium phosphate), member 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
protein STPG3
Names
sperm-tail PG-rich repeat-containing protein 3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001399439.1NP_001386368.1  protein STPG3

    Status: VALIDATED

    Source sequence(s)
    AL732309
    UniProtKB/Swiss-Prot
    A2RSX4
  2. NM_028961.2NP_083237.1  protein STPG3

    See identical proteins and their annotated locations for NP_083237.1

    Status: VALIDATED

    Source sequence(s)
    AL732309
    Consensus CDS
    CCDS50525.1
    UniProtKB/Swiss-Prot
    A2RSX4
    UniProtKB/TrEMBL
    Q8CDQ3
    Related
    ENSMUSP00000037603.5, ENSMUST00000043774.11

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    25102219..25108680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011239203.3XP_011237505.1  protein STPG3 isoform X1

    UniProtKB/TrEMBL
    Q8CDQ3