Pabir3 PABIR family member 3 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Pabir3provided by MGI
Official Full Name: PABIR family member 3provided by MGI
Primary source: MGI:MGI:1921116
See related: Ensembl:ENSMUSG00000036013 AllianceGenome:MGI:1921116
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Fam122c; 4930432H15Rik; 4930527G05Rik
Summary: Predicted to enable protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in mitotic G2/M transition checkpoint. Predicted to be active in cytoplasm and nucleus. Orthologous to human PABIR3 (PABIR family member 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Restricted expression toward testis adult (RPKM 12.2) See more
Orthologs: human all
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Genomic context

Location:: X A5; X 29.45 cM

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (52362296..52420063)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (53273419..53331186)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (2)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables protein serine/threonine phosphatase inhibitor activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mitotic G2/M transition checkpoint	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: protein FAM122C

Names: family with sequence similarity 122, member C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_028671.3 → NP_082947.1 protein FAM122C

See identical proteins and their annotated locations for NP_082947.1

Status: VALIDATED

Source sequence(s)

AK015288, AK015916

Consensus CDS

CCDS40973.1

UniProtKB/TrEMBL

Q9D514, Q9D5J5

Related

ENSMUSP00000110484.2, ENSMUST00000114835.8

RNA

NR_153099.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

BC147640, BX679674
NR_153100.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AK015288, BX679674