U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

1700109I08Rik RIKEN cDNA 1700109I08 gene [ Mus musculus (house mouse) ]

Gene ID: 73591, updated on 8-Feb-2024

Summary

Official Symbol
1700109I08Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700109I08 geneprovided by MGI
Primary source
MGI:MGI:1920841
See related
Ensembl:ENSMUSG00000101261 AllianceGenome:MGI:1920841
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 6.1) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See 1700109I08Rik in Genome Data Viewer
Location:
14; 14 B
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (39377620..39407250)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (39655663..39685293)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene neuregulin 3 Neighboring gene predicted gene, 31606 Neighboring gene uncharacterized LOC432842 Neighboring gene potassium channel modulatory factor 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_36448 Neighboring gene STARR-seq mESC enhancer starr_36449 Neighboring gene STARR-seq mESC enhancer starr_36450 Neighboring gene predicted gene, 35389 Neighboring gene STARR-seq mESC enhancer starr_36451 Neighboring gene eukaryotic translation initiation factor 1, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045936.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC154487, AK007151
    Related
    ENSMUST00000185680.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    39377620..39407250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)