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Glrx5 glutaredoxin 5 [ Mus musculus (house mouse) ]

Gene ID: 73046, updated on 5-Mar-2024

Summary

Official Symbol
Glrx5provided by MGI
Official Full Name
glutaredoxin 5provided by MGI
Primary source
MGI:MGI:1920296
See related
Ensembl:ENSMUSG00000021102 AllianceGenome:MGI:1920296
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
This gene encodes a mitochondrial protein, which is evolutionarily conserved. It is involved in the biogenesis of iron-sulfur clusters, which are required for normal iron homeostasis. Mutations in the human gene are associated with autosomal recessive pyridoxine-refractory sideroblastic anemia. [provided by RefSeq, Sep 2015]
Expression
Ubiquitous expression in liver E14.5 (RPKM 213.8), liver E14 (RPKM 197.7) and 27 other tissues See more
Orthologs
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Genomic context

See Glrx5 in Genome Data Viewer
Location:
12 E; 12 55.04 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (104998877..105007170)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (105032618..105040911)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing, nuclear envelope family member 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:106251266-106251483 Neighboring gene predicted gene, 31742 Neighboring gene STARR-positive B cell enhancer ABC_E7177 Neighboring gene small Cajal body-specific RNA 13 Neighboring gene microRNA 3069 Neighboring gene small nucleolar RNA host gene 10 Neighboring gene predicted gene, 46374 Neighboring gene predicted gene, 31884 Neighboring gene predicted gene, 31829 Neighboring gene STARR-seq mESC enhancer starr_33165 Neighboring gene STARR-seq mESC enhancer starr_33166

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • 2310004O13Rik, 2900070E19Rik

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in [2Fe-2S] cluster assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in protein maturation by [2Fe-2S] cluster transfer ISO
Inferred from Sequence Orthology
more info
 
involved_in protein maturation by [4Fe-4S] cluster transfer ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
part_of iron-sulfur cluster assembly complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in mitochondrial matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
glutaredoxin-related protein 5, mitochondrial
Names
glutaredoxin 5 homolog
monothiol glutaredoxin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028419.3NP_082695.1  glutaredoxin-related protein 5, mitochondrial

    See identical proteins and their annotated locations for NP_082695.1

    Status: REVIEWED

    Source sequence(s)
    AK013761, CJ071975, CJ265616, CX243759
    Consensus CDS
    CCDS26154.1
    UniProtKB/Swiss-Prot
    Q3YML1, Q80Y14, Q9D6E9
    Related
    ENSMUSP00000021522.4, ENSMUST00000021522.5
    Conserved Domains (1) summary
    cd03028
    Location:41131
    GRX_PICOT_like; Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    104998877..105007170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)