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ABCC6P2 ATP binding cassette subfamily C member 6 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 730013, updated on 8-Nov-2023

Summary

Official Symbol
ABCC6P2provided by HGNC
Official Full Name
ATP binding cassette subfamily C member 6 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:33353
See related
Ensembl:ENSG00000290943 AllianceGenome:HGNC:33353
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 13.5), liver (RPKM 8.1) and 12 other tissues See more
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Genomic context

Location:
16p13.11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (14822427..14824702, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (14820822..14823097, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (14916284..14918559, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene nuclear pore complex interacting protein family member A2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:14860458-14860958 Neighboring gene phospholipase A2 group XE, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:14918841-14919569 Neighboring gene NODAL modulator 1 Neighboring gene uncharacterized LOC101927469 Neighboring gene microRNA 3179-1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_023387.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC136443
    Related
    ENST00000542005.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    14822427..14824702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187607.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    962183..964458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    14820822..14823097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)