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Insig2 insulin induced gene 2 [ Mus musculus (house mouse) ]

Gene ID: 72999, updated on 5-Mar-2024

Summary

Official Symbol
Insig2provided by MGI
Official Full Name
insulin induced gene 2provided by MGI
Primary source
MGI:MGI:1920249
See related
Ensembl:ENSMUSG00000003721 AllianceGenome:MGI:1920249
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Insig-2; 2900053I11Rik; C730043J18Rik
Summary
Predicted to enable oxysterol binding activity. Acts upstream of or within several processes, including cholesterol biosynthetic process; ear morphogenesis; and negative regulation of lipid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of SREBP-SCAP-Insig complex. Predicted to be active in endoplasmic reticulum. Is expressed in central nervous system; jaw bone; and retina. Orthologous to human INSIG2 (insulin induced gene 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in liver adult (RPKM 40.0), large intestine adult (RPKM 16.4) and 26 other tissues See more
Orthologs
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Genomic context

Location:
1 E2.3; 1 52.91 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (121232082..121260391, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (121304353..121332662, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene cerebellum expressed regulatory RNA Neighboring gene predicted gene, 46155 Neighboring gene STARR-seq mESC enhancer starr_02073 Neighboring gene predicted gene, 41940 Neighboring gene STARR-seq mESC enhancer starr_02074 Neighboring gene STARR-positive B cell enhancer ABC_E3298 Neighboring gene RIKEN cDNA 2210011K15 gene Neighboring gene STARR-seq mESC enhancer starr_02075 Neighboring gene STARR-positive B cell enhancer ABC_E10030 Neighboring gene predicted gene, 35243

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (3) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables oxysterol binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein sequestering activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in SREBP signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in SREBP signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in SREBP-SCAP complex retention in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in SREBP-SCAP complex retention in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to insulin stimulus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cholesterol biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cholesterol biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in cholesterol biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within cholesterol metabolic process IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within cranial suture morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within inner ear morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within middle ear morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within negative regulation of fatty acid biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within negative regulation of steroid biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within response to sterol depletion IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within roof of mouth development IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within steroid metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within sterol biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within triglyceride metabolic process IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of SREBP-SCAP-Insig complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of SREBP-SCAP-Insig complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
is_active_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
insulin-induced gene 2 protein
Names
INSIG-2 membrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271531.1NP_001258460.1  insulin-induced gene 2 protein isoform 1

    See identical proteins and their annotated locations for NP_001258460.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same isoform (1).
    Source sequence(s)
    AK050394, BC023067
    Consensus CDS
    CCDS15236.1
    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Related
    ENSMUSP00000124345.2, ENSMUST00000159085.8
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)
  2. NM_001271532.1NP_001258461.1  insulin-induced gene 2 protein isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks an exon which contains a portion of the 5' UTR and 5' coding region including the start codon, compared to variant 1. These differences cause translation initiation at a downstream start codon and result in an isoform (2) with a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AC163333
    Consensus CDS
    CCDS78670.1
    UniProtKB/TrEMBL
    A0A087WQP7
    Related
    ENSMUSP00000140292.2, ENSMUST00000186915.2
    Conserved Domains (1) summary
    pfam07281
    Location:1103
    INSIG; Insulin-induced protein (INSIG)
  3. NM_001357251.1NP_001344180.1  insulin-induced gene 2 protein isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC163333
    Consensus CDS
    CCDS15236.1
    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)
  4. NM_133748.2NP_598509.1  insulin-induced gene 2 protein isoform 1

    See identical proteins and their annotated locations for NP_598509.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1, 2 and 3 encode the same isoform (1).
    Source sequence(s)
    AC163333, BC023067
    Consensus CDS
    CCDS15236.1
    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Related
    ENSMUSP00000003818.8, ENSMUST00000003818.14
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)
  5. NM_178082.3NP_835183.1  insulin-induced gene 2 protein isoform 1

    See identical proteins and their annotated locations for NP_835183.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same isoform (1).
    Source sequence(s)
    AK040703, AY156084, BC023067
    Consensus CDS
    CCDS15236.1
    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Related
    ENSMUSP00000065485.7, ENSMUST00000071064.13
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    121232082..121260391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006529891.4XP_006529954.1  insulin-induced gene 2 protein isoform X1

    See identical proteins and their annotated locations for XP_006529954.1

    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)
  2. XM_006529892.2XP_006529955.1  insulin-induced gene 2 protein isoform X1

    See identical proteins and their annotated locations for XP_006529955.1

    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)
  3. XM_006529889.2XP_006529952.1  insulin-induced gene 2 protein isoform X1

    See identical proteins and their annotated locations for XP_006529952.1

    UniProtKB/Swiss-Prot
    Q3TMY2, Q8BWP1, Q91WG1
    Conserved Domains (1) summary
    pfam07281
    Location:31211
    INSIG; Insulin-induced protein (INSIG)