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RPL23AP63 ribosomal protein L23a pseudogene 63 [ Homo sapiens (human) ]

Gene ID: 729798, updated on 10-Oct-2023

Summary

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Official Symbol
RPL23AP63provided by HGNC
Official Full Name
ribosomal protein L23a pseudogene 63provided by HGNC
Primary source
HGNC:HGNC:35502
See related
AllianceGenome:HGNC:35502
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL23A_28_1140
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Genomic context

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Location:
11p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (43718656..43719383)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (43874072..43874799)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (43740206..43740933)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like Neighboring gene hydroxysteroid 17-beta dehydrogenase 12 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:43596905-43597647 Neighboring gene Sharpr-MPRA regulatory region 5565 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3268 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3269 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:43602229-43603028 Neighboring gene MIR670 host gene Neighboring gene microRNA 129-2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4641 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4642 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:43702143-43702708 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4643 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4645 Neighboring gene PHB1 pseudogene 2 Neighboring gene MPRA-validated peak1263 silencer Neighboring gene uncharacterized LOC107984328 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:43852011-43853210

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011026.2 

    Range
    101..828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    43718656..43719383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    43874072..43874799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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