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HMGB3P19 high mobility group box 3 pseudogene 19 [ Homo sapiens (human) ]

Gene ID: 729635, updated on 10-Oct-2023

Summary

Official Symbol
HMGB3P19provided by HGNC
Official Full Name
high mobility group box 3 pseudogene 19provided by HGNC
Primary source
HGNC:HGNC:39311
See related
AllianceGenome:HGNC:39311
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
6q25.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (153938161..153939073, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (155140215..155141127, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (154259296..154260208, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene MT-ND4 pseudogene 13 Neighboring gene RNA, U6 small nuclear 896, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:154152732-154153497 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr6:154165602-154166102 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:154182024-154182524 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:154360635-154361134 Neighboring gene opioid receptor mu 1 Neighboring gene interaction protein for cytohesin exchange factors 1 Neighboring gene MPRA-validated peak6225 silencer Neighboring gene ribosomal protein L17 pseudogene 24 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25295 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25296 Neighboring gene MPRA-validated peak6226 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:154663434-154664366 Neighboring gene uncharacterized LOC105378067

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022333.3 

    Range
    101..1013
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    153938161..153939073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    155140215..155141127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)