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RPL21P16 ribosomal protein L21 pseudogene 16 [ Homo sapiens (human) ]

Gene ID: 729402, updated on 10-Oct-2023

Summary

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Official Symbol
RPL21P16provided by HGNC
Official Full Name
ribosomal protein L21 pseudogene 16provided by HGNC
Primary source
HGNC:HGNC:31396
See related
Ensembl:ENSG00000220842 AllianceGenome:HGNC:31396
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL21_38_1104
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Genomic context

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See RPL21P16 in Genome Data Viewer
Location:
10q26.12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (120354645..120355226, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (121252716..121253297, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (122114157..122114738, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902514 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_10450 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:121886698-121887677 Neighboring gene uncharacterized LOC105378515 Neighboring gene NANOG hESC enhancer GRCh37_chr10:122037489-122038058 Neighboring gene NANOG hESC enhancer GRCh37_chr10:122156017-122156526 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:122263320-122264519 Neighboring gene phospholipid phosphatase 4 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:122315391-122316125 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:122334639-122335138 Neighboring gene long intergenic non-protein coding RNA 1561

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. Bennett EJ, et al. Cell, 2010 Dec 10. PMID 21145461, Free PMC Article
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009450.2 

    Range
    101..682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    120354645..120355226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    121252716..121253297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001139505.1: Suppressed sequence

    Description
    NM_001139505.1: This RefSeq was suppressed permanently because this locus is not protein-coding.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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