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KATNBL1P6 katanin regulatory subunit B1 like 1 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 729176, updated on 10-Oct-2023

Summary

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Official Symbol
KATNBL1P6provided by HGNC
Official Full Name
katanin regulatory subunit B1 like 1 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:49056
See related
AllianceGenome:HGNC:49056
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
6q24.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (146801669..146803824, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (147994895..147997050, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (147122805..147124960, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901517 Neighboring gene androglobin Neighboring gene uncharacterized LOC105378040 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:147150949-147151716 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25232 Neighboring gene STXBP5 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17645 Neighboring gene Sharpr-MPRA regulatory region 4352 Neighboring gene Sharpr-MPRA regulatory region 12413 Neighboring gene Sharpr-MPRA regulatory region 4624 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:147365163-147366362 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:147374300-147374964 Neighboring gene uncharacterized LOC124901422 Neighboring gene lung adenocarcinoma associated transcript 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Other Names

  • katanin p80 subunit B-like 1 pseudogene 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003954.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL138916, BC067801

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    146801669..146803824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    147994895..147997050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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