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RPL36AP23 ribosomal protein L36a pseudogene 23 [ Homo sapiens (human) ]

Gene ID: 729075, updated on 10-Oct-2023

Summary

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Official Symbol
RPL36AP23provided by HGNC
Official Full Name
ribosomal protein L36a pseudogene 23provided by HGNC
Primary source
HGNC:HGNC:36002
See related
Ensembl:ENSG00000241722 AllianceGenome:HGNC:36002
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL36A_6_507
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Genomic context

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See RPL36AP23 in Genome Data Viewer
Location:
4q25
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (111551834..111552222)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (114853422..114853810)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (112472990..112473378)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377364 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:111985445-111986130 Neighboring gene NANOG hESC enhancer GRCh37_chr4:112130089-112130590 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:112257809-112258404 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:112258405-112259000 Neighboring gene RNA, U6 small nuclear 289, pseudogene Neighboring gene VISTA enhancer hs559 Neighboring gene uncharacterized LOC105377366 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:112596428-112597128 Neighboring gene uncharacterized LOC105377367 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72110

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011389.3 

    Range
    101..489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    111551834..111552222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    114853422..114853810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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