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RPS19P3 ribosomal protein S19 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 728953, updated on 10-Oct-2023

Summary

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Official Symbol
RPS19P3provided by HGNC
Official Full Name
ribosomal protein S19 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:23560
See related
AllianceGenome:HGNC:23560
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS19_4_1350
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Genomic context

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See RPS19P3 in Genome Data Viewer
Location:
14q13.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (34568617..34569169, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (28764641..28765193, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (35037823..35038375, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370449 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:35015659-35016230 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:35016231-35016802 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:35022516-35022692 Neighboring gene RNA, U1 small nuclear 27, pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:35024749-35025306 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:35025307-35025864 Neighboring gene RNA, U1 small nuclear 28, pseudogene Neighboring gene sorting nexin 6 Neighboring gene Sharpr-MPRA regulatory region 6350 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5666 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8255 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:35117872-35118710 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:35121050-35121268 Neighboring gene RNA, U6 small nuclear 1261, pseudogene Neighboring gene uncharacterized LOC107984628 Neighboring gene ribosomal protein L23a pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. Elzi DJ, et al. J Proteome Res, 2014 Aug 1. PMID 24999758, Free PMC Article
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009541.3 

    Range
    101..653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    34568617..34569169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    28764641..28765193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases