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PTMAP8 prothymosin alpha pseudogene 8 [ Homo sapiens (human) ]

Gene ID: 728873, updated on 10-Oct-2023

Summary

Official Symbol
PTMAP8provided by HGNC
Official Full Name
prothymosin alpha pseudogene 8provided by HGNC
Primary source
HGNC:HGNC:42437
See related
AllianceGenome:HGNC:42437
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
3q13.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (117026518..117027239)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (119746417..119747141)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (116745365..116746086)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 901 Neighboring gene RNA, U5E small nuclear 8, pseudogene Neighboring gene uncharacterized LOC124909415 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:116733888-116735087 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:116763215-116764082 Neighboring gene uncharacterized LOC105374054 Neighboring gene uncharacterized LOC124906271 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:117077285-117077786

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_031895.2 

    Range
    21..742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    117026518..117027239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    119746417..119747141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)