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SUMO2P21 SUMO2 pseudogene 21 [ Homo sapiens (human) ]

Gene ID: 728825, updated on 10-Oct-2023

Summary

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Official Symbol
SUMO2P21provided by HGNC
Official Full Name
SUMO2 pseudogene 21provided by HGNC
Primary source
HGNC:HGNC:55054
See related
AllianceGenome:HGNC:55054
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xq23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (115718340..115719354, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (114126523..114127537, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (114952660..114953674, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:114914725-114915276 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:114919634-114920622 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:114921722-114922477 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:114923989-114924743 Neighboring gene argininosuccinate synthetase 1 pseudogene 5 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:114927785-114928376 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:114953159-114953672 Neighboring gene eukaryotic translation elongation factor 1 gamma pseudogene 5 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:114971507-114972076 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:114957011-114957610 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:114957611-114958209 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:114983330-114983960 Neighboring gene DXZ4 associated non-coding transcript 2, distal Neighboring gene DXZ4 associated non-coding transcript 1, proximal Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:114999239-114999784 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115003482-115004005 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115004006-115004528 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115004529-115005052 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115005053-115005575 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:115009227-115009726 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29865 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:115017017-115017518 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29866 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:115057053-115057566 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:115076570-115077070 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115082956-115083533 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:115083534-115084110 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:115099695-115100571 Neighboring gene RNA, 7SL, cytoplasmic 712, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • SMT3 suppressor of mif two 3 homolog 2 pseudogene
  • small ubiquitin-like modifier 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005816.4 

    Range
    101..1115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    115718340..115719354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    114126523..114127537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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