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TATDN1P1 TatD DNase domain containing 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 728737, updated on 10-Oct-2023

Summary

Official Symbol
TATDN1P1provided by HGNC
Official Full Name
TatD DNase domain containing 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:45058
See related
Ensembl:ENSG00000234369 AllianceGenome:HGNC:45058
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
10q21.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (63222124..63223134)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (64080235..64081246)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (64981884..64982894)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378328 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2405 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2406 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3434 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3435 Neighboring gene nuclear receptor binding factor 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:64940417-64940613 Neighboring gene NANOG hESC enhancer GRCh37_chr10:64959364-64959900 Neighboring gene jumonji domain containing 1C Neighboring gene MPRA-validated peak963 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr10:65000486-65001022 Neighboring gene uncharacterized LOC124900287 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:65028313-65028838 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:65028839-65029362 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:65029678-65030178 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:65030179-65030679 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3436 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3437 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:65120829-65121029 Neighboring gene NANOG hESC enhancer GRCh37_chr10:65125666-65126167 Neighboring gene microRNA 1296

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011726.2 

    Range
    101..1111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    63222124..63223134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    64080235..64081246
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    GenBank, FASTA, Sequence Viewer (Graphics)