These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001201380.3 → NP_001188309.2  contactin-associated protein-like 3B precursor

   Status: VALIDATED

   Source sequence(s)

   AL953854, BX649569, CR788268

   Consensus CDS

   CCDS75836.1

   UniProtKB/Swiss-Prot

   A0A087WUH3, B1B0V7, B1B0V8, B1B0V9, B1B0W0, B1B0X8, B1B162, Q4VXF0, Q96NU0, Q9H7W3

   UniProtKB/TrEMBL

   A0A087X119

   Related

   ENSP00000478671.2, ENST00000377561.7

   Conserved Domains (5) summary

   cd00057
   Location:54 → 176

   FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

   cd00110
   Location:794 → 938

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   pfam00008
   Location:551 → 582

   EGF; EGF-like domain

   cl00085
   Location:590 → 635

   FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

   pfam02210
   Location:212 → 341

   Laminin_G_2; Laminin G domain

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCh38.p14 Primary Assembly

Genomic

1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

   Range

   41890536..42129426 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

1. NC_060933.1 Alternate T2T-CHM13v2.0

   Range

   43440970..43679972 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_054363732.1 → XP_054219707.1  contactin-associated protein-like 3B isoform X11

2. XM_054363730.1 → XP_054219705.1  contactin-associated protein-like 3B isoform X9

3. XM_054363729.1 → XP_054219704.1  contactin-associated protein-like 3B isoform X8

4. XM_054363741.1 → XP_054219716.1  contactin-associated protein-like 3B isoform X20

5. XM_054363721.1 → XP_054219696.1  contactin-associated protein-like 3B isoform X1

6. XM_054363726.1 → XP_054219701.1  contactin-associated protein-like 3B isoform X6

7. XM_054363725.1 → XP_054219700.1  contactin-associated protein-like 3B isoform X5

8. XM_054363724.1 → XP_054219699.1  contactin-associated protein-like 3B isoform X4

9. XM_054363722.1 → XP_054219697.1  contactin-associated protein-like 3B isoform X2

10. XM_054363723.1 → XP_054219698.1  contactin-associated protein-like 3B isoform X3

11. XM_054363731.1 → XP_054219706.1  contactin-associated protein-like 3B isoform X10

12. XM_054363727.1 → XP_054219702.1  contactin-associated protein-like 3B isoform X7

13. XM_054363728.1 → XP_054219703.1  contactin-associated protein-like 3B isoform X7

14. XM_054363733.1 → XP_054219708.1  contactin-associated protein-like 3B isoform X12

15. XM_054363739.1 → XP_054219714.1  contactin-associated protein-like 3B isoform X18

16. XM_054363736.1 → XP_054219711.1  contactin-associated protein-like 3B isoform X15

17. XM_054363735.1 → XP_054219710.1  contactin-associated protein-like 3B isoform X14

18. XM_054363734.1 → XP_054219709.1  contactin-associated protein-like 3B isoform X13

19. XM_054363738.1 → XP_054219713.1  contactin-associated protein-like 3B isoform X17

20. XM_054363737.1 → XP_054219712.1  contactin-associated protein-like 3B isoform X16

21. XM_054363740.1 → XP_054219715.1  contactin-associated protein-like 3B isoform X19

The following Reference Sequences have been suppressed. Explain

These RefSeqs were suppressed for the cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links, or BLAST links (BLink), but may still be retrieved by clicking on their accession.version below.

1. NG_023472.1: Suppressed sequence

   Description

   NG_023472.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.

2. NG_030301.1: Suppressed sequence

   Description

   NG_030301.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.