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LOC728506 POM121 membrane glycoprotein (rat) pseudogene [ Homo sapiens (human) ]

Gene ID: 728506, updated on 10-Oct-2023

Summary

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Gene symbol
LOC728506
Gene description
POM121 membrane glycoprotein (rat) pseudogene
See related
Ensembl:ENSG00000251158
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
5q13.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (69898215..69903409, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (70980866..70988596)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (69194042..69199236, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900997 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:68958303-68958856 Neighboring gene POM121 membrane glycoprotein (rat) pseudogene Neighboring gene GUSB pseudogene 3 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69005506-69006322 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69006323-69007139 Neighboring gene NANOG hESC enhancer GRCh37_chr5:69068631-69069132 Neighboring gene uncharacterized LOC105379623 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:69139757-69140580 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:69185827-69186428 Neighboring gene uncharacterized LOC124900996 Neighboring gene GUSB pseudogene 13 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr5:69257484-69258124 Neighboring gene cadherin 12 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006091.4 

    Range
    101..5295
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    69898215..69903409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791777.1 Reference GRCh38.p14 PATCHES

    Range
    1014226..1021956
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187651.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    103610..107664 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    70980866..70988596
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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