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RPL7AP70 ribosomal protein L7a pseudogene 70 [ Homo sapiens (human) ]

Gene ID: 728139, updated on 10-Oct-2023

Summary

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Official Symbol
RPL7AP70provided by HGNC
Official Full Name
ribosomal protein L7a pseudogene 70provided by HGNC
Primary source
HGNC:HGNC:36752
See related
Ensembl:ENSG00000235776 AllianceGenome:HGNC:36752
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL7A_32_1739
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Genomic context

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See RPL7AP70 in Genome Data Viewer
Location:
22q11.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (19792275..19793154)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (20169145..20170024)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (19779798..19780677)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372861 Neighboring gene Sharpr-MPRA regulatory region 13949 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19730021-19730596 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19730597-19731170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19734624-19735124 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19744621-19745499 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19745779-19746288 Neighboring gene VISTA enhancer hs515 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19750215-19751157 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:19758419-19758590 Neighboring gene T-box transcription factor 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:19764062-19764563 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19771036-19771536 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19771537-19772037 Neighboring gene G protein subunit beta 1 like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19784762-19785467 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19786734-19787315 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:19794010-19794254 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:19799088-19799263 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19810945-19811459 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19831532-19832045 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19832046-19832558 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19832559-19833071 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19840887-19841505 Neighboring gene uncharacterized LOC124905080 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18663 Neighboring gene retrotransposon Gag like 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010403.2 

    Range
    101..980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    19792275..19793154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    20169145..20170024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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