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RPL15P18 ribosomal protein L15 pseudogene 18 [ Homo sapiens (human) ]

Gene ID: 728088, updated on 10-Oct-2023

Summary

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Official Symbol
RPL15P18provided by HGNC
Official Full Name
ribosomal protein L15 pseudogene 18provided by HGNC
Primary source
HGNC:HGNC:36515
See related
Ensembl:ENSG00000228501 AllianceGenome:HGNC:36515
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL15_5_1331
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Genomic context

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Location:
13q32.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (100150440..100151135, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (99363947..99364642, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (100802694..100803389, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:100732007-100732527 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7958 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7959 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5476 Neighboring gene Sharpr-MPRA regulatory region 14306 Neighboring gene ASNS pseudogene 3 Neighboring gene PCCA divergent transcript Neighboring gene OCT4-H3K27ac hESC enhancer GRCh37_chr13:100781340-100781840 Neighboring gene OCT4-H3K27ac hESC enhancer GRCh37_chr13:100781841-100782341 Neighboring gene propionyl-CoA carboxylase subunit alpha Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:100800509-100801160 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:100802588-100803130 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:100803131-100803672 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:100811517-100812018 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:100812019-100812518 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:100849737-100850237 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:100875184-100875695 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:100875696-100876206 Neighboring gene uncharacterized LOC105370335 Neighboring gene Sharpr-MPRA regulatory region 7114 Neighboring gene uncharacterized LOC124903201 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:101044561-101045760

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010118.3 

    Range
    101..796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    100150440..100151135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    99363947..99364642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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