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LINC02203 long intergenic non-protein coding RNA 2203 [ Homo sapiens (human) ]

Gene ID: 727924, updated on 8-Nov-2023

Summary

Official Symbol
LINC02203provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2203provided by HGNC
Primary source
HGNC:HGNC:53069
See related
Ensembl:ENSG00000284988 AllianceGenome:HGNC:53069
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and detection of chemical stimulus involved in sensory perception of smell. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis (RPKM 11.6) See more
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Genomic context

Location:
15q11.2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (21552773..21640521)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (22195583..22199978)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene microRNA 5701-2 Neighboring gene olfactory receptor family 11 subfamily J member 1 pseudogene Neighboring gene olfactory receptor 11H12-like Neighboring gene olfactory receptor family 11 subfamily K member 1B pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene olfactory receptor family 4 subfamily H member 6B pseudogene Neighboring gene olfactory receptor family 4 subfamily M member 2B Neighboring gene olfactory receptor family 4 subfamily N member 4C Neighboring gene olfactory receptor family 4 subfamily N member 3B pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015416.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC135068, BC062994, BI560827
  2. NR_152818.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BI560827, DQ786202
    Related
    ENST00000643304.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    21552773..21640521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    2141939..2229684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187602.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    310612..405685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)