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Smim24 small integral membrane protein 24 [ Mus musculus (house mouse) ]

Gene ID: 72273, updated on 5-Mar-2024

Summary

Official Symbol
Smim24provided by MGI
Official Full Name
small integral membrane protein 24provided by MGI
Primary source
MGI:MGI:1919523
See related
Ensembl:ENSMUSG00000078439 AllianceGenome:MGI:1919523
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2210404O07Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SMIM24 (small integral membrane protein 24). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in duodenum adult (RPKM 3556.1), small intestine adult (RPKM 1736.1) and 5 other tissues See more
Orthologs
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Genomic context

Location:
10 C1; 10 39.72 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81228898..81230913)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81393064..81395079)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 48551 Neighboring gene microRNA 6913 Neighboring gene deoxyhypusine hydroxylase/monooxygenase Neighboring gene predicted gene, 48552 Neighboring gene nuclear factor I/C Neighboring gene predicted gene 16104 Neighboring gene microRNA 1191b

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small integral membrane protein 24
Names
transmembrane protein C19orf77 homolog
transmembrane protein HSPC323 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099917.1NP_001093387.1  small integral membrane protein 24 precursor

    See identical proteins and their annotated locations for NP_001093387.1

    Status: PROVISIONAL

    Source sequence(s)
    BC117023
    Consensus CDS
    CCDS35998.1
    UniProtKB/Swiss-Prot
    Q0VG18
    Related
    ENSMUSP00000100959.3, ENSMUST00000105322.9
    Conserved Domains (1) summary
    pfam15807
    Location:17120
    MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    81228898..81230913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)