U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cracdl capping protein inhibiting regulator of actin like [ Mus musculus (house mouse) ]

Gene ID: 72097, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
Cracdlprovided by MGI
Official Full Name
capping protein inhibiting regulator of actin likeprovided by MGI
Primary source
MGI:MGI:1919347
See related
Ensembl:ENSMUSG00000026090 AllianceGenome:MGI:1919347
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010300C02Rik
Summary
Is expressed in lung and testis. Orthologous to human CRACDL (CRACD like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in frontal lobe adult (RPKM 20.2), cortex adult (RPKM 19.8) and 11 other tissues See more
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
1 B; 1 15.57 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (37650758..37758905, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (37611676..37720089, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene mannoside acetylglucosaminyltransferase 4, isoenzyme A Neighboring gene G1 to S phase transition pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E1541 Neighboring gene STARR-seq mESC enhancer starr_00677 Neighboring gene predicted gene, 39627 Neighboring gene STARR-positive B cell enhancer ABC_E5748 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37642841-37643028 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37643098-37643207 Neighboring gene RIKEN cDNA 4930556I23 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37671888-37672102 Neighboring gene STARR-seq mESC enhancer starr_00679 Neighboring gene RIKEN cDNA 4930470B04 gene Neighboring gene STARR-seq mESC enhancer starr_00681 Neighboring gene STARR-seq mESC enhancer starr_00682 Neighboring gene predicted gene, 39628 Neighboring gene testis specific 10 Neighboring gene STARR-seq mESC enhancer starr_00684 Neighboring gene STARR-positive B cell enhancer mm9_chr1:37921599-37921900 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37922129-37922238 Neighboring gene lipoyltransferase 1 Neighboring gene MIT, microtubule interacting and transport, domain containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Analysis of Uncharacterized mKiaa1211 Expression during Mouse Development and Cardiovascular Morphogenesis. Snider PL, et al. J Cardiovasc Dev Dis, 2019 Jun 22. PMID 31234534, Free PMC Article
  2. 140 mouse brain proteins identified by Ca2+-calmodulin affinity chromatography and tandem mass spectrometry. Berggård T, et al. J Proteome Res, 2006 Mar. PMID 16512683
  3. Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set. VanBuren V, et al. Genome Res, 2002 Dec. PMID 12466305, Free PMC Article
  4. Interactome Analysis Reveals Regulator of G Protein Signaling 14 (RGS14) is a Novel Calcium/Calmodulin (Ca(2+)/CaM) and CaM Kinase II (CaMKII) Binding Partner. Evans PR, et al. J Proteome Res, 2018 Apr 6. PMID 29518331, Free PMC Article
  5. Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors. Kim H, et al. Cell, 2018 Dec 13. PMID 30550785, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (2) 

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
CRACD-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001403619.1 → NP_001390548.1  CRACD-like protein isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC123068, AC140321

  2. NM_001403620.1 → NP_001390549.1  CRACD-like protein isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC123068, AC140321

  3. NM_001403621.1 → NP_001390550.1  CRACD-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC123068, AC140321
    UniProtKB/TrEMBL
    E9Q3M9

  4. NM_001403622.1 → NP_001390551.1  CRACD-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC123068, AC140321
    UniProtKB/TrEMBL
    E9Q3M9

  5. NM_028096.2 → NP_082372.1  CRACD-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC123068, AC140321
    Consensus CDS
    CCDS48242.1
    UniProtKB/TrEMBL
    E9Q3M9
    Related
    ENSMUSP00000123803.2, ENSMUST00000162875.8
    Conserved Domains (4) summary
    PTZ00436
    Location:500 → 628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430 → 818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:695 → 1039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145 → 243
    DUF4592; Domain of unknown function (DUF4592)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    37650758..37758905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006496297.3 → XP_006496360.1  CRACD-like protein isoform X4

    See identical proteins and their annotated locations for XP_006496360.1

    Conserved Domains (4) summary
    PTZ00436
    Location:500 → 628
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:430 → 818
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:695 → 1039
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:145 → 243
    DUF4592; Domain of unknown function (DUF4592)

  2. XM_006496292.5 → XP_006496355.2  CRACD-like protein isoform X2

    Conserved Domains (4) summary
    PTZ00436
    Location:528 → 656
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:458 → 846
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:723 → 1067
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:173 → 271
    DUF4592; Domain of unknown function (DUF4592)

  3. XM_006496291.5 → XP_006496354.2  CRACD-like protein isoform X1

    Conserved Domains (4) summary
    PTZ00436
    Location:528 → 656
    PTZ00436; 60S ribosomal protein L19-like protein; Provisional
    PHA03307
    Location:458 → 846
    PHA03307; transcriptional regulator ICP4; Provisional
    PRK07764
    Location:723 → 1067
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam15262
    Location:173 → 271
    DUF4592; Domain of unknown function (DUF4592)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous