Zcchc24 zinc finger, CCHC domain containing 24 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Zcchc24provided by MGI
Official Full Name: zinc finger, CCHC domain containing 24provided by MGI
Primary source: MGI:MGI:1919168
See related: Ensembl:ENSMUSG00000055538 AllianceGenome:MGI:1919168
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 2310047A01Rik
Summary: Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to act upstream of or within regulation of gliogenesis. Orthologous to human ZCCHC24 (zinc finger CCHC-type containing 24). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in subcutaneous fat pad adult (RPKM 45.1), mammary gland adult (RPKM 33.6) and 27 other tissues See more
Orthologs: human all
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Genomic context

Location:: 14 A3; 14 15.06 cM

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	14	NC_000080.7 (25712068..25769496, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	14	NC_000080.6 (25711644..25769072, complement)

Chromosome 14 - NC_000080.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (2)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of gliogenesis	ISO Inferred from Sequence Orthology more info	PubMed

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: zinc finger CCHC domain-containing protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001101433.2 → NP_001094903.1 zinc finger CCHC domain-containing protein 24

See identical proteins and their annotated locations for NP_001094903.1

Status: VALIDATED

Source sequence(s)

AC154759, AC164303

Consensus CDS

CCDS49419.1

UniProtKB/Swiss-Prot

B2RVL6

Related

ENSMUSP00000068677.7, ENSMUST00000069180.8

Conserved Domains (2) summary

COG5222
Location:58 → 157

COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

pfam17180
Location:164 → 230

zf-3CxxC_2; Zinc-binding domain