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Bpifb9a BPI fold containing family B, member 9A [ Mus musculus (house mouse) ]

Gene ID: 71425, updated on 8-Feb-2024

Summary

Official Symbol
Bpifb9aprovided by MGI
Official Full Name
BPI fold containing family B, member 9Aprovided by MGI
Primary source
MGI:MGI:3767993
See related
Ensembl:ENSMUSG00000067998 AllianceGenome:MGI:3767993
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI413838; 4833413D08Rik
Summary
Predicted to enable lipid binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Orthologous to human BPIFB9P (BPI fold containing family B member 9, pseudogene). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
2 H1; 2 76.34 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (154099774..154113165)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (154257879..154271245)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene BPI fold containing family B, member 1 Neighboring gene CDK5 regulatory subunit associated protein 1 Neighboring gene BPI fold containing family B, member 5 Neighboring gene STARR-seq mESC enhancer starr_06113 Neighboring gene STARR-seq mESC enhancer starr_06114 Neighboring gene zinc finger protein 54-like Neighboring gene BPI fold containing family B, member 9B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Clone Names

  • MGC91146, MGC102620

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175167.4NP_780376.2  vomeromodulin precursor

    See identical proteins and their annotated locations for NP_780376.2

    Status: VALIDATED

    Source sequence(s)
    AL732601
    Consensus CDS
    CCDS50761.1
    UniProtKB/Swiss-Prot
    A2AJD0, Q5XK13, Q80XI7, Q8CDY1
    Related
    ENSMUSP00000086314.6, ENSMUST00000088924.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    154099774..154113165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)